Richard Sprague

My personal website

Microbiome


Note: I’m working on a major new project to make it easy for normal people to understand their microbiome test results. Meanwhile, if you’ve tested yourself with uBiome or others, please contact me and I’ll be happy to help you (if you give me your data!)

Click the following:

My Best Posts
For “final” versions of my microbiome experiment summaries, please see my entries at Personal Science and the Microbiome on Medium.

Personal Science Guide to the Microbiome: an ebook summary of everything I know about the microbiome. Eventually this will replace everything on this page.

Microbiome Labs: How Actionable Are They Today? In the Future?: Podcast interview with Damien Blenkinsopp

Surfing the Microbiome: Interview with Mark Swanson in Naturopathic Doctor News & Review.

“So Should I Eat Apples or Not?” My review of the Viome microbiome gut test.

“When a Double-Chocolate Brownie is Better for You Than Quinoa” My review of the new DayTwo microbiome testing app. Published by NEO.LIFE

Fusicatenibacter Is Associated With Kefir Drinking My preprint academic paper, submitted to peer review, about a microbe association I discovered in a self-experiment.

How to interpret your uBiome results: My article in O’Reilly’s BioCoder.

How does kombucha affect the microbiome Tracking my microbiome while drinking kombucha.

uBiome official Python Utilities Open source Python module for analyzing your uBiome results.

Peeking into a Baby Biome: Investigating a baby and her mother.

Posts to the uBiome blog
Experimenting with a gut cleanse: before/during/after results from a one-month experiment.

Hacking my sleep with uBiome and an update.

Looking into my mouth microbiome: testing myself at the dentist.

One week change in my microbiome: a before/after test with detailed food tracking.

My microbiome in the jungle: how my gut biome changed during a trip to Central America.

Technical uBiome posts

What do I do with my raw data?

Invitation to the uBiome open source repository

How to make a single table of your uBiome results

How to analyze a uBiome sample in Excel

Richard Sprague: "Microbiome Gut Cleanse" from Quantified Self on Vimeo.

My presentation at a Quantified Self meetup in San Francisco 2016.

2019

2018

2017

2015